Protein ZmGATA5
ZmGATA5 is a protein in the C2C2-GATA family.
Information
TF Name: ZmGATA5
Species: Maize
TF Family: C2C2-GATA
Gene Name(Synonym): GATA5
Uniprot ID: B4FZE9
Subgenome: 1

Protein ZmGATA5

ZmGATA5 is a protein in the C2C2-GATA family.

Overview of domains present in v5 transcripts
PF00320
Zm00001eb075150_T002
Zm00001eb075150_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d002790DAPseq no logo sequence fimo position
Zm00001d002790DAPseq no logo sequence fimo position
Zm00001d002790ChIPseq no logo sequence fimo position
Zm00001d002790PChIPseq no logo sequence fimo position

Interactions where ZmGATA5 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGATA5 is the target  
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There are 51 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb075150_T002 from maize genome v5

Amino Acid Sequence
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MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLANYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNH
IIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAADASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKL
AKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVLLRHPNSKSLEKESEASSIPADNKSYITSESYSGSASF
AIHNGNKAAINLNASNARLKKSPLHMEDNARRGVGSISGPEGFTKSTMKPLKRPRDTQFQIDAELEGTMRSPLRGLKSGA
LAQFESSSLPKSGYTTKDSTCTGGALNLFMLPPEKLLVVPPQYVDPDQDLLLEIPLNARHPEAELLCQPSQLMSSISRSS
TSMGGVAEGEGCLKQP

MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLANYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNH
IIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAADASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKL
AKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVLLRHPNSKSLEKESEASSIPADNKSYITSESYSGSASF
AIHNGNKAAINLNASNARLKKSPLHMEDNARRGVGSISGPEGFTKSTMKPLKRPRDTQFQIDAELEGTMRSPLRGLKSGA
LAQFESSSLPKSGYTTKDSTCTGGALNLFMLPPEKLLVVPPQYVDPDQDLLLEIPLNARHPEAELLCQPSQLMSSISRSS
TSMGGVAEGEGCLKQP

MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLANYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNH
IIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAADASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKL
AKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVLLRHPNSKSLEKESEASSIPADNKSYITSESYSGSASF
AIHNGNKAAINLNASNARLKKSPLHMEDNARRGVGSISGPEGFTKSTMKPLKRPRDTQFQIDAELEGTMRSPLRGLKSGA
LAQFESSSLPKSGYTTKDSTCTGGALNLFMLPPEKLLVVPPQYVDPDQDLLLEIPLNARHPEAELLCQPSQLMSSISRSS
TSMGGVAEGEGCLKQP

MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLANYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNH
IIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAADASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKL
AKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVLLRHPNSKSLEKESEASSIPADNKSYITSESYSGSASF
AIHNGNKAAINLNASNARLKKSPLHMEDNARRGVGSISGPEGFTKSTMKPLKRPRDTQFQIDAELEGTMRSPLRGLKSGA
LAQFESSSLPKSGYTTKDSTCTGGALNLFMLPPEKLLVVPPQYVDPDQDLLLEIPLNARHPEAELLCQPSQLMSSISRSS
TSMGGVAEGEGCLKQP

MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLANYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNH
IIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAADASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKL
AKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVLLRHPNSKSLEKESEASSIPADNKSYITSESYSGSASF
AIHNGNKAAINLNASNARLKKSPLHMEDNARRGVGSISGPEGFTKSTMKPLKRPRDTQFQIDAELEGTMRSPLRGLKSGA
LAQFESSSLPKSGYTTKDSTCTGGALNLFMLPPEKLLVVPPQYVDPDQDLLLEIPLNARHPEAELLCQPSQLMSSISRSS
TSMGGVAEGEGCLKQP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00320
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Nucleotide Sequence
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AATCCCCTCCGTGCTGCTGCATTCC...

GRMZM2G077002_T01 from maize genome v3


Related TFome: pUT3386

Amino Acid Sequence
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MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLANYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNH
IIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAADASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKL
AKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVLLRHPNSKSLEKESEASSIPADNKSYITSESYSGSASF
AIHNGNKAAINLNASNARLKKSPLHMEDNARRGVGSISGPEGFTKSTMKPLKRPRDTQFQIDAELEGTMRSPLRGLKSGA
LAQFESSSLPKSGYTTKDSTCTGGALNLFMLPPEKLLVVPPQYVDPDQDLLLEIPLNARHPEAELLCQPSQLMSSISRSS
TSMGGVAEGEGCLKQP

Nucleotide Sequence
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GCTGCTGCATTCCTTCCTCTATTAT...

GRMZM2G077002_T02 from maize genome v3

Amino Acid Sequence
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MGKQGPCRHCGVTSELLFLNKAIIFLPAVFSLLFSSPFLPLFLSK

Nucleotide Sequence
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GCTGCTGCATTCCTTCCTCTATTAT...

Zm00001d002790_T001 from maize genome v4

Amino Acid Sequence
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MCIVYYPFSVFPALTSFLLHVNSDMNSELVRWAYFCTSVLMDFSWKNGGAGTPLWRNGPPDKPVLCNACGSRWRTKGSLA
NYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNHIIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAA
DASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKLAKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVL
LRHPNSKSLEKESEASSIPADNKSYITSESYSGSASFAIHNGNKAAINLNASNARLKKSPLHMEDNARRCYTFYIRISIE
VGT

Nucleotide Sequence
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CAACCCTTTCCCCTCTCTTTCTCTC...

Zm00001d002790_T002 from maize genome v4

Amino Acid Sequence
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MGKQGPCRHCGVTSELFCGEMGHQISRCSAMHVARDGEQRVHWQTTLQCIARTILMTMNPELAS

Nucleotide Sequence
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TGCATTCCTTCCTCTATTATTTCTC...

Zm00001eb075150_T001 from maize genome v5

Amino Acid Sequence
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MGKQGPCRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLANYTPMHRKDDIDDDEPRVSKLKPPTSKLKSQKKKPNH
IIMENGPFSGQNFRKMGDVDQSYRSSSGSAVSYSESCAPYGAADASEMTGSAQSHAWESLVPSRKRSCVTRPKPSPVEKL
AKDLNFIMHEEQLYYPSGSSEEDLLYHSETPVGSFEMGSGSVLLRHPNSKSLEKESEASSIPADNKSYITSESYSGSASF
AIHNGNKAAINLNASNARLKKSPLHMEDNARSYFGNQGSREHQWSGRLYQVYYETTQKTP

Nucleotide Sequence
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TCCTCCCCCAAATGCCTTTAACCAG...


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